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analysis [2012/10/01 18:10] lgarcia [MCN selection analysis - Using a seed list] |
analysis [2012/10/22 19:59] (current) lgarcia [MCN selection analysis - Default] |
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| * Second, the score is computed. The score can be seen as a balance between the increase in connected nodes and the distance to the top of the ranked list. | * Second, the score is computed. The score can be seen as a balance between the increase in connected nodes and the distance to the top of the ranked list. | ||
| * Third we choose the best partition. | * Third we choose the best partition. | ||
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| + | {{:screen_shot_2012-10-22_at_19.58.31.png|}} | ||
| An empirical p-value is calculated as the proportion of 2000 random sublists of the same size as best partition (which corrects the size effect) with a value for the network parameter greater than the best partition. | An empirical p-value is calculated as the proportion of 2000 random sublists of the same size as best partition (which corrects the size effect) with a value for the network parameter greater than the best partition. | ||