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start [2009/12/30 23:57]
aconesa
start [2010/05/03 16:51] (current)
jcarbonell
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 ====== Serial Expression Analysis ====== ====== Serial Expression Analysis ======
  
 **S**erial **E**xpression **A**nalysis (**SEA**) is a web site for the analysis of serial gene expression data. Serial data is understood as multifactorial experimental designs where one of the factors is a quantitative variable such as time or treatment dose. The site offers five different methodologies for the identification of genes and functional classes which significant changes across series. \\ **S**erial **E**xpression **A**nalysis (**SEA**) is a web site for the analysis of serial gene expression data. Serial data is understood as multifactorial experimental designs where one of the factors is a quantitative variable such as time or treatment dose. The site offers five different methodologies for the identification of genes and functional classes which significant changes across series. \\
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 The following table summarizes the main characteristics of the SEA algorithms:​\\ The following table summarizes the main characteristics of the SEA algorithms:​\\
  
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 |maSigPro|Univariate Regression|Genes| Genes with differential expression profiles| |maSigPro|Univariate Regression|Genes| Genes with differential expression profiles|
 |maSigFun| Univariate Regression| Functional Categories|Functional classes with most genes having correlated differential expression profiles| |maSigFun| Univariate Regression| Functional Categories|Functional classes with most genes having correlated differential expression profiles|
-|ASCA-genes|ANOVA+Multivariate Projection|Genes|Genes that follow major expression trends| +|ASCA-genes|ANOVA + Multivariate Projection|Genes|Genes that follow major expression trends| 
-|ASCA-functional|ANOVA+Multivariate Projection+GSA|Functional Categories|Functional classes associated to a given expression trend| +|ASCA-functional|ANOVA + Multivariate Projection + GSA|Functional Categories|Functional classes associated to a given expression trend| 
-|PCA-maSigPro|Multivariate Projection+Univariate Regression|Functional Categories| Functional classes with subset of genes  showing correlated differential expression profiles| ​+|PCA-maSigFun|Multivariate Projection + Univariate Regression|Functional Categories| Functional classes with subset of genes  showing correlated differential expression profiles| ​
start.1262213837.txt.gz · Last modified: 2009/12/30 23:57 by aconesa
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