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formats [2010/05/04 23:21]
aconesa
formats [2010/05/04 23:41]
aconesa
Line 14: Line 14:
   * **Covariates**:​ txt file with experimental design information,​ containing as many columns as arrays and as many rows as experimental factors. Each cell contains the value of the array in the experimental factor: \\   * **Covariates**:​ txt file with experimental design information,​ containing as many columns as arrays and as many rows as experimental factors. Each cell contains the value of the array in the experimental factor: \\
  \\  \\
-|Time|3|3|3|9|9|9|27|27|27| +|Time|3|3|3|9|9|9|27|27|27|…
-|Treatment|Ctr|TrA|TrB|Ctr|TrA|TrB|Ctr|TrA|TrB|+|Treatment|Ctr|TrA|TrB|Ctr|TrA|TrB|Ctr|TrA|TrB|…|
 \\ \\
-Experimental factors must have always more than one level, i.e. two or more time-points,​ two or more treatments. If not, the experimental factor cannot be considered as such and should not be included in the covariates file.+Experimental factors must have always ​**more than one level**, i.e. two or more time-points,​ two or more treatments, etc. If not, the experimental factor cannot be considered as such and should not be included in the covariates file.
 \\ \\
 \\ \\
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 |gene_3|GO:​0087630| |gene_3|GO:​0087630|
 |gene_3|GO:​0008977| |gene_3|GO:​0008977|
 +|...|...|
 +\\
 +For data file examples, go to the [[examples| Worked Examples]] Menu
 \\ \\
formats.txt · Last modified: 2011/08/31 09:51 by aconesa
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