https://bioinfo.cipf.es/phylemonwiki/ 2026-04-25T12:39:50+0200 https://bioinfo.cipf.es/phylemonwiki/ https://bioinfo.cipf.es/phylemonwiki/lib/tpl/arctic/images/favicon.ico text/html 2012-07-02T18:50:07+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?id=extras:faqs&rev=1341247807&do=diff Frequented Asked Questions and Tips Is there a kind of "one click" way to build a phylogeny from my not aligned sequences? We did not implemented a direct way to build phylogenies from a single pipeline of programs. But each user can easily build its own text/html 2012-02-19T15:44:22+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?id=sidebar&rev=1329662662&do=diff -> Welcome page -> Starting With Phylemon RoadMapCreate New AccountMy first projectPhylemon environment (projects, data, account...)Trial on MyFirstProject Tool description * Alignment * Phylogeny * Evolutionary tests * Utilities * Pipeliner (about phylogenomics) Exercises AlignmentPhylogenyEvolutionary testsUtilitiesCase study Extras Input Data FormatCreditFAQS / TIPSCite the tools in Phylemon News Publications Phylemon2 (Nucl. Acids Res. 2011)Phylemon (Nucl. Acids Res. 2007) Us… text/html 2011-07-01T19:53:42+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=news%3Ajmodeltest_redirections.png&ns=news&rev=1309542822&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=300&t=1309542822&amp;tok=ad484b&amp;media=news:jmodeltest_redirections.png" alt="news:jmodeltest_redirections.png" /> text/html 2011-07-01T19:51:00+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=news%3Aarcheopteryx_jmodeltest.png&ns=news&rev=1309542660&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=378&t=1309542660&amp;tok=bc0561&amp;media=news:archeopteryx_jmodeltest.png" alt="news:archeopteryx_jmodeltest.png" /> text/html 2011-06-01T12:43:36+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=tools%3Am2702.jpg&ns=tools&rev=1306925016&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=350&t=1306925016&amp;tok=49a818&amp;media=tools:m2702.jpg" alt="tools:m2702.jpg" /> text/html 2011-05-25T18:48:46+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=snapshots%3Aarcheopteryx.png&ns=snapshots&rev=1306342126&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=368&t=1306342126&amp;tok=7ac66d&amp;media=snapshots:archeopteryx.png" alt="snapshots:archeopteryx.png" /> text/html 2011-04-14T18:14:31+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=phylemon%3Abasic_roadmap_1.gif&ns=phylemon&rev=1302797671&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=481&t=1302797671&amp;tok=7643a9&amp;media=phylemon:basic_roadmap_1.gif" alt="phylemon:basic_roadmap_1.gif" /> text/html 2011-04-13T15:41:50+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=exercices%3Abrc1-2_cds.zip&ns=exercices&rev=1302702110&tab_details=history&mediado=diff&do=media text/html 2011-04-13T15:40:40+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=exercices%3Abrc1-1l_cds.zip&ns=exercices&rev=1302702040&tab_details=history&mediado=diff&do=media text/html 2011-04-11T12:51:54+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=documentation%3Ahlrt.png&ns=documentation&rev=1302519114&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=226&t=1302519114&amp;tok=2c656f&amp;media=documentation:hlrt.png" alt="documentation:hlrt.png" /> text/html 2011-04-11T12:47:22+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=documentation%3Adlrt.png&ns=documentation&rev=1302518842&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=499&h=354&t=1302518842&amp;tok=0ea297&amp;media=documentation:dlrt.png" alt="documentation:dlrt.png" /> text/html 2011-04-07T19:44:47+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=snapshots%3Amrbayes_format.png&ns=snapshots&rev=1302198287&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=377&t=1302198287&amp;tok=e53d9d&amp;media=snapshots:mrbayes_format.png" alt="snapshots:mrbayes_format.png" /> text/html 2011-04-07T18:24:22+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=snapshots%3Amrbayes_format2.png&ns=snapshots&rev=1302193462&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=377&t=1302193462&amp;tok=02e1ce&amp;media=snapshots:mrbayes_format2.png" alt="snapshots:mrbayes_format2.png" /> text/html 2011-04-04T14:47:56+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=icons%3Agus48.png&ns=icons&rev=1301921276&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=60&h=65&t=1301921276&amp;tok=a6ec15&amp;media=icons:gus48.png" alt="icons:gus48.png" /> text/html 2011-03-31T11:51:20+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=snapshots%3Atrial_p53_data.png&ns=snapshots&rev=1301565080&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=323&h=500&t=1301565080&amp;tok=af90d3&amp;media=snapshots:trial_p53_data.png" alt="snapshots:trial_p53_data.png" /> text/html 2011-03-31T11:46:57+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=snapshots%3Atrail_p53_treeview.png&ns=snapshots&rev=1301564817&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=384&t=1301564817&amp;tok=941b53&amp;media=snapshots:trail_p53_treeview.png" alt="snapshots:trail_p53_treeview.png" /> text/html 2011-03-31T11:41:01+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=snapshots%3Ap53_ete.png&ns=snapshots&rev=1301564461&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=392&t=1301564460&amp;tok=2f8193&amp;media=snapshots:p53_ete.png" alt="snapshots:p53_ete.png" /> text/html 2011-03-31T11:17:18+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=snapshots%3Ap53_neighbor_result.png&ns=snapshots&rev=1301563038&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=410&h=500&t=1301563038&amp;tok=3deed5&amp;media=snapshots:p53_neighbor_result.png" alt="snapshots:p53_neighbor_result.png" /> text/html 2011-03-31T11:14:29+0200 garamonfok (garamonfok@undisclosed.example.com) https://bioinfo.cipf.es/phylemonwiki/doku.php?image=exercices%3Ap53_neighbor.png&ns=exercices&rev=1301562869&tab_details=history&mediado=diff&do=media <img src="https://bioinfo.cipf.es/phylemonwiki/lib/exe/fetch.php?w=500&h=479&t=1301562869&amp;tok=892975&amp;media=exercices:p53_neighbor.png" alt="exercices:p53_neighbor.png" />