\\ ====== Publications ====== \\ **ResearcherID**: [[https://www.researchgate.net/profile/Francisco_Garcia-Garcia|ResearchGate]], [[http://www.researcherid.com/rid/B-1929-2014|B-1929-2014]], [[http://www.ncbi.nlm.nih.gov/myncbi/browse/collection/44869149/?sort=date&direction=descending|NCBI Publications]] [[https://scholar.google.com/citations?hl=es&user=szgBSEkAAAAJ&view_op=list_works&sortby=pubdate | Google scholar]] \\ \\ ===== Bioinformatics and Genomics ===== /* IF and Q from: http://bib.us.es/sites/bib3.us.es/files/jcr_2015_science.pdf JCR Science (05/07/2016) */ \\ **2019** \\ /* ***Rilpivirine attenuates liver fibrosis through selective STAT1-mediated apoptosis in hepatic stellate cells**. Gut, Sep 2019.** Gastroenterologoy & Hepatology, Q1, IF:17.943**. */ ***Association of a single nucleotide polymorphism in Ubxn6 gene with long term non progression phenotype in hiv-positive individuals**. Díez-Fuertes F, Erick de la Torre-Tarazona H, Calonge E, Pernas M, Bermejo M, García-Pérez J, Álvarez A, Capa L, García-García F, Saumoy M, Riera M, Boland-Auge A, López-Galíndez C, Lathrop M, Dopazo J, Sakuntabhai A, Alcamí J. Clin Microbiol Infect. 2019 May 31;. doi: 10.1016/j.cmi.2019.05.015. [Epub ahead of print] PubMed PMID: 31158522. **Infectious diseases, Q1, IF:6.425**. ***Characterization of molecular mechanisms underlying the axonal Charcot-Marie-Tooth neuropathy caused by MORC2 mutations**. Sancho P, Bartesaghi L, Miossec O, García-García F, Ramírez-Jiménez L, Siddell A, Åkesson E, Hedlund E, Laššuthová P, Pascual-Pascual SI, Sevilla T, Kennerson M, Lupo V, Chrast R, Espinós C. Hum Mol Genet. 2019 May 15;28(10):1629-1644. doi: 10.1093/hmg/ddz006. PubMed PMID: 30624633. **Genetics & Heredity, Q1, IF:4.544**. ***Differences in gene expression profiling and biomarkers between histological colorectal carcinoma subsets from the serrated pathway. Histopathology**. García-Solano J, Turpin-Sevilla MDC, García-García F, Carbonell-Muñoz R, Torres-Moreno D, Conesa A, Conesa-Zamora P. 2019 Apr 26;. doi: 10.1111/his.13889. [Epub ahead of print] PubMed PMID: 31025430. **Pathology, Q1, IF:3.294**. ***Differential expression of circulating miRNAs as a novel tool to assess BAG3-associated familial dilated cardiomyopathy**. Zaragoza C, Saura M, Hernández I, Ramirez-Carracedo R, García-García F, Zamorano JL, Mangas A, Toro R. Biosci Rep. 2019 Mar 29;39(3). doi: 10.1042/BSR20180934. Print 2019 Mar 29. PubMed PMID: 30792263; PubMed Central PMCID: PMC6418398. **Biophysics, Q1, IF:2.535**. ***Fibroblast activation and abnormal extracellular matrix remodelling as common hallmarks in three cancer-prone genodermatoses**. Chacón-Solano E, León C, Díaz F, García-García F, García M, Escámez MJ, Guerrero-Aspizua S, Conti CJ, Mencía Á, Martínez-Santamaría L, Llames S, Pévida M, Carbonell-Caballero J, Puig-Butillé JA, Maseda R, Puig S, de Lucas R, Baselga E, Larcher F, Dopazo J, Del Río M. Br J Dermatol. 2019 Jan 28;. doi: 10.1111/bjd.17698. [Epub ahead of print] PubMed PMID: 30693469. **Dermatology, Q1, IF:6.714**. \\ **2018** \\ ***Deep sequencing and miRNA profiles in alcohol-induced neuroinflammation and the TLR4 response in mice cerebral cortex**. Ureña-Peralta JR, Alfonso-Loeches S, Cuesta-Diaz CM, García-García F, Guerri C. Sci Rep. 2018 Oct 29;8(1):15913. doi: 10.1038/s41598-018-34277-y. PubMed PMID: 30374194; PubMed Central PMCID: PMC6206094. **Multidisciplinary Sciences, Q1, IF:4.122**. ***Prognostic value of quantitative ctDNA levels in non small cell lung cancer patients.** M Torrente , V Calvo , D Perez-Callejo , L Gutiérrez , F Franco , C Pérez-Barrios , M Barquín , A Royuela , F Garcia-Garcia , C Bueno , A García-Grande , C Camps , B Massuti , E Sotomayor , A Romero. Oncotarget. 2018. **Oncology**. ***[[http://journal.frontiersin.org/article/10.3389/fcvm.2018.00152/full?&utm_source=Email_to_authors_&utm_medium=Email&utm_content=T1_11.5e1_author&utm_campaign=Email_publication&field=&journalName=Frontiers_in_Cardiovascular_Medicine&id=403440|Extracellular vesicles of hypoxic cardiomyocytes modulate fibroblast cell motility.]]** Imelda Ontoria-Oviedo, Akaitz Dorronsoro, Rafael Sánchez, Maria Ciria, Marta Gómez-Ferrer, Marc Buigues, Elena Grueso, Sandra Tejedor, Francisco García-García, Hernan González-King, Nahuel Garcia, Esteban Peiró-Molina, Pilar Sepúlveda. Frontiers in Cardiovascular Medicine, section Cardiovascular Biologics and Regenerative Medicine. 2018. \\ **2017** \\ ***Integration of transcriptomic and metabolic data reveals hub transcription factors involved in drought stress response in sunflower (Helianthus annuus L.)** S Moschen, J Di Rienzo, J Higgins, T Tohge, M Watanabe, S González, M Rivarola, F García-García, J Dopazo, HE Hopp, R Hoefgen, A Fernie, N Paniego, P Fernández, R Heinz. [[https://rd.springer.com/article/10.1007/s11103-017-0625-5?wt_mc=Internal.Event.1.SEM.ArticleAuthorOnlineFirst|Plant Molecular Biology (2017). doi:10.1007/s11103-017-0625-5]]. **Agricultural and Biological Sciences, rank:80/289, Q2, IF: 3.543**. ***Mutations in TRAPPC11 are associated with a congenital disorder of glycosylation.** L Matalonga, M Bravo, C Serra Peinado, E García-Pelegrí, O Ugarteburu, S Vidal, M Llambrich, E Quintana, P Fuster-Jorge, MN Gonzalez-Bravo, S Beltran, J Dopazo, F Garcia-Garcia, F Foulquier, G Matthijs, P Mills, A Ribes, G Egea, P Briones, F Tort and M Girós. {{:matalonga2016.pdf|Human Mutation. Nov 2016. DOI: 10.1002/humu.23145}}. **Genetics & Heredity, rank: 23/166, Q1, IF: 5.359**. ***Gender differences in the inflammatory cytokine and chemokine profiles induced by binge ethanol drinking in adolescence**. M Pascual, J Montesinos , M Marcos, JL Torres, P Costa-Alba, F García-García, FJ Laso, C Guerri. {{:gender.pdf|Addiction Biology}}. Volume 22, Issue6, Nov 2017, pages 1829-1841. **Substance Abuse, rank: 2/18, Q1, IF: 2.669**. \\ **2016** \\ ***[[http://www.impactjournals.com/oncotarget/index.php?journal=oncotarget&page=article&op=download&path%5B%5D=14140&path%5B%5D=45092|Genomic expression differences between cutaneous cells from red hair color individuals and black hair color individuals based on bioinformatic analysis.]]** P Gimenez-Xavier, A Visconti, J Nsengimana, F García-García, G Tell-Marti, MJ Escamez, J Newton-Bishop, V Bataille, M del Río, J Dopazo, M Falchi, Susanna Puig. [[http://www.impactjournals.com/oncotarget/index.php?journal=oncotarget&page=article&op=view&path[]=14140&author-preview=aws| Oncotarget. Dec 2016.]] **Oncology, rank: 36/213, Q1, IF:5.168**. ***Dysfunctional mitochondrial fission impairs cell reprogramming.** J Prieto, M Leon, X Ponsoda, F García-García, R Bort, E Serna, M Barneo-Muñoz, F Palau, J Dopazo, C Lopez, J Torres. [[http://www.tandfonline.com/doi/full/10.1080/15384101.2016.1241930|Cell Cycle. 2016 Oct 18:0. DOI: 10.1080/15384101.2016.1241930]]. **Cell Biology, rank: 68/187, Q2, IF: 3.530**. ***Identification of the Photoreceptor Transcriptional Co-Repressor SAMD11 as Novel Cause of Autosomal Recessive Retinitis Pigmentosa.** M. Corton, A. Avila-Fernández, L. Campello, M. Sánchez, B. Benavides, M. I. López-Molina, L. Fernández-Sánchez, R. Sánchez-Alcudia, L. R. J. da Silva, N. Reyes, E. Martín-Garrido, O. Zurita, P. Fernández-San José, R. Pérez-Carro, F. García-García, J. Dopazo, B. García-Sandoval, N. Cuenca & C. Ayuso. {{:corton2016.pdf|Scientific Reports 6, Article number: 35370 (2016) doi:10.1038/srep35370}}. **Multidisciplinary Sciences, rank: 7/63, Q1, IF: 4.259**. ***Integrated Gene Set Analysis for microRNA Studies.** Garcia-Garcia F, Panadero J, Dopazo J, Montaner D. {{:garciagarcia2016.pdf|Bioinformatics 2016; doi: 10.1093/bioinformatics/btw334}}. **Biotechnology & applied Microbiology, rank: 15/161, Q1, IF: 7.307**. ***The transcriptomics of an experimentally evolved plant-virus interaction.** J Hillung, F García-García,J Dopazo, J Cuevas, S Elena. {{:selena.pdf|Sci Rep. 2016 Apr 26;6:24901. doi: 10.1038/srep24901.}} **Multidisciplinary Sciences, rank:7/63, Q1, IF: 4.259**. ***Serum metabolomic profiling facilitates the non-invasive identification of metabolic biomarkers associated with the onset and progression of non-small cell lung cancer **. Puchades-Carrasco, L., Jantus-Lewintre, E., Pérez-Rambla, C., García-García, F., Lucas, R., Calabuig, S., ... & Pineda-Lucena. {{::7354-111575-3-pb.pdf|Oncotarget. 2016 Feb 12. doi: 10.18632/oncotarget.7354.}} **Oncology, rank: 36/213, Q1, IF: 5.168**. *** 267 Spanish exomes reveal population-specific differences in disease-related genetic variation**. Dopazo J, Amadoz A, Bleda M, Garcia-Alonso L, Alemán A, García-García F, Rodriguez JA, Daub JT, Muntané G, Rueda A, Vela-Boza A, López-Domingo FJ, Florido JP, Arce P, Ruiz-Ferrer M, Méndez-Vidal C, Arnold TE, Spleiss O, Alvarez-Tejado M, Navarro A, Bhattacharya SS, Borrego S, Santoyo-López J, Antiñolo G. [[http://mbe.oxfordjournals.org/content/early/2016/01/12/molbev.msw005| Molecular Biology and Evolution. 2016 Jan 13, doi: 10.1093/molbev/msw005]]. **Biochemistry & Molecular Biology, rank: 5/289, Q1, IF: 6.202**. *** Assessment of targeted next generation sequencing as a tool for the diagnosis of Charcot-Marie-Tooth disease and hereditary motor neuropathy**. V Lupo, F García-García, P Sancho, C Tello, M García-Romero, L Villarreal, A Alberti, R Sivera, J Dopazo, S Pascual-Pascual, C Márquez-Infante, C Casasnovas, T Sevilla, C Espinós. Journal of Molecular Diagnostics. Jan 2016. {{:lupo2016.pdf|DOI:http://dx.doi.org/10.1016/j.jmoldx.2015.10.005}}. **Pathology, rank: 7/79, Q1, IF: 4.526**. ***Screening of CD96 and ASXL1 in 11 patients with Opitz C or Bohring-Opitz syndromes**. Urreizti R, Roca N, Trepat J, Garcia-Garcia F, Aleman A, Orteschi D, Marangi G, Neri G, Opitz JM, Dopazo J, Cormand B, Vilageliu L, Balcells S, Grinberg D. Screening of CD96 and ASXL1 in 11 patients with Opitz C or Bohring-Opitz syndromes. [[https://www.ncbi.nlm.nih.gov/pubmed/26768331|Am J Med Genet. DOI: 10.1002/ajmg.a.37418]]. **Genetics & Heredity, rank: 106/166, Q3, IF: 2.259**. \\ **2015** \\ *** Global transcriptome analysis of primary cerebrocortical cells: Identification of genes regulated by triiodothyronine in specific cell types**. Gil-Ibañez P, García-García F, Dopazo J, Bernal J, Morte B. [[https://www.ncbi.nlm.nih.gov/pubmed/26534908|Cereb Cortex. 3 Nov 2015. doi: 10.1093/cercor/bhv273.]] **Neurosciences, rank: 17/256, Q1, IF: 8.285**. ***Differential features between chronic skin inflammatory diseases revealed in new psoriasis and atopic dermatitis skin-humanized mouse models**. M Carretero, S Guerrero-Aspizua, N Illera, V Galvez, M Navarro, F García-García, J Dopazo, J L Jorcano, F Larcher and M del Rio. [[https://www.ncbi.nlm.nih.gov/pubmed/26398345|J Invest Dermatol. 2015 Sep 23. doi: 10.1038/jid.2015.362.]] **Dermatology, rank: 1/61, Q1, IF: 6.915**. ***Integrating transcriptomic and metabolomic analysis to understand natural leaf senescence in sunflower**. Moschen, Sebastian; Bengoa Luoni, Sofía; Di Rienzo, Julio; Caro, Maria; Tohge, Takayuki; Watanabe, Mutsumi; Hollmann, Julien; González, Sergio; Rivarola, Máximo; García-García, Francisco; Dopazo, Joaquin; Hopp, H.; Hoefgen, Rainer; Fernie, Alisdair; Paniego, Norma; Fernández, Paula; Heinz, Ruth. {{:moschen_et_al_2015_bbj.pdf|Plant Biotechnology Journal 2015 Jul 1. doi: 10.1111/pbi.12422}} **Plant Sciences, rank: 11/209, Q1, IF: 6.090**. ***Deregulation of key signaling pathways involved in oocyte maturation in FMR1 premutation carriers with Fragile X-associated primary ovarian insufficiency**. Alvarez-Mora MI, Rodriguez-Revenga L, Madrigal I, Garcia-Garcia F, Duran M, Dopazo J, Estivill X, Milà M.{{:fmr1.pdf|Gene. 2015 Jun 18. pii: S0378-1119(15)00748-9. doi: 10.1016/j.gene.2015.06.039}}. **Genetics & Heredity, rank: 92/166, Q3, IF: 2.319**. ***Babelomics 5.0: functional interpretation for new generations of genomic data**. Alonso, R; Salavert, F; Garcia-Garcia, F; Carbonell, J; Bleda, Marta; Garcia-Alonso, L; Sanchis-Juan, A; Pérez-Gil, D; Marin-Garcia, P; Sanchez, R; Cubuk, C; Hidalgo, Marta; Amadoz, A; Hernansaiz-Ballesteros, R; Aleman, A; Tarraga, J; Montaner, D; Medina, I; Dopazo, J. [[http://nar.oxfordjournals.org/content/early/2015/04/20/nar.gkv384.full|Nucl. Acids Res. (2015) doi: 10.1093/nar/gkv384]]. **Biochemistry & Molecular Biology, rank: 18/289, Q1, IF: 9.202**. ***Whole Exome Sequencing Reveals ZNF408 as a New Gene Associated With Autosomal Recessive Retinitis Pigmentosa with Vitreal Alterations**. A Avila-Fernandez; R Perez-Carro; M Corton; MI Lopez-Molina; L Campello; A Garanto; L Fernadez-Sanchez; L Duijkers; MA Lopez-Martinez; R Riveiro-Alvarez; L Rodrigues Jacy da Silva; R Sanchez-Alcudia; E Martin-Garrido; N Reyes; F Garcia-Garcia; J Dopazo; B Garcia-Sandoval; RW Collin; N Cuenca; C Ayuso. [[http://hmg.oxfordjournals.org/content/early/2015/04/16/hmg.ddv140.full.pdf?keytype=ref&ijkey=BLpWYzzEbWZ4yuH |Human Molecular Genetics 2015; doi: 10.1093/hmg/ddv140 ]]. **Genetics & Heredity, rank: 16/166, Q1, IF: 5.985**. ***BRCA1 alternative splicing landscape in breast tissue samples**. A Romero, F García-García, I López-Perolio, G Ruiz Garibay, JA García-Sáenz, P Garre, P Ayllón, E Benito, J Dopazo, E Díaz-Rubio, T Caldés, M Hoya. [[http://www.biomedcentral.com/1471-2407/15/219|BMC Cancer, Apr 2015; 15. DOI: 10.1186/s12885-015-1145-9]]. **Oncology, rank: 85/213, Q2,IF: 3.265**. \\ **2014** \\ ***Permanent Cardiac Sarcomere Changes in a Rabbit Model of Intrauterine Growth Restriction**. Iratxe Torre, Anna González-Tendero, Patricia García-Cañadilla, Fátima Crispi, Francisco García-García, Bart Bijnens, Igor Iruretagoyena, Joaquin Dopazo, Ivan Amat-Roldán, Eduard Gratacós. [[http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0113067|PLoS ONE 9(11): e113067. doi:10.1371/journal.pone.0113067]], 17 Nov 2014. **Multidisciplinary Sciences, rank: 11/63, Q1, IF: 3.234**. ***The activation of the Sox2 RR2 pluripotency transcriptional reporter in human breast cancer cell lines is dynamic and labels cells with higher tumorigenic potential**. Juan Manuel Iglesias, Olatz Leis Esnaola, Estibaliz Perez Ruiz, Juan Gumuzio Barrie, Francisco Garcia-Garcia, Ariane Aduriz, Izaskun Beloqui, Susana Hernandez Garcia, Maria Paz Lopez Mato, Joaquin Dopazo, Atanasio Pandiella, Javier Menendez, Angel Garcia Martin. {{:fonc-04-00308.pdf|Front. Oncol., 04 November 2014 | doi: 10.3389/fonc.2014.00308.}}, Nov 2014. ***A web tool for the design and management of panels of genes for targeted enrichment and massive sequencing for clinical applications**.Aleman, Alejandro; Garcia-Garcia, Francisco; Medina, Ignacio; Dopazo, Joaquin. {{:team.pdf|Nucleic Acids Res. 2014 May 26. pii: gku472.}} **Biochemistry & Molecular Biology, rank: 20/290, Q1, IF: 9.112**. ***A web-based interactive framework to assist in the prioritization of disease candidate genes in whole exome sequencing studies**. Aleman, Alejandro; Garcia-Garcia, Francisco; Salavert, Francisco; Medina, Ignacio; Dopazo, Joaquin. {{::bierapp.pdf|Nucleic Acids Research. 2014 May 6. PMID: 24803668}}. **Biochemistry & Molecular Biology, rank: 20/290, Q1, IF: 9.112**. ***Programmed cell death activated by Rose Bengal in Arabidopsis thaliana cell suspension cultures requires functional chloroplasts**. Jorge Gutiérrez, Sergio González-Pérez, Francisco García-García, Cara T. Daly, Óscar Lorenzo, José L. Revuelta, Paul F. McCabe, Juan B. Arellano. {{:experimental_botany_2014.pdf|Journal of Experimental Botany, April 2014, doi:10.1093/jxb/eru151.}} April 2014. **Plant Sciences, rank: 12/204, Q1, IF: 5.526**. ***Capturing the biological impact of CDKN2A and MC1R genes as an early predisposing event in melanoma and non melanoma skin cancer**. Joan Anton Puig-Butille, María José Escámez, Francisco Garcia-Garcia, Gemma Tell-Marti, Àngels Fabra, Lucía Martínez-Santamaría, Celia Badenas, Paula Aguilera, Marta Pevida, Joaquín Dopazo, Marcela del Río, Susana Puig. {{:oncotarget.pdf|Oncotarget}}, Vol 5, No 6, March 2014. **Oncology, rank: 21/211, Q1, IF: 6.359**. \\ **2013** \\ ***Intrauterine growth restriction is associated with cardiac ultrastructural and gene expression changes related to the energetic metabolism in a rabbit model**. Anna Gonzalez-Tendero, Iratxe Torre, Patricia Garcia-Canadilla, Fatima Crispi, Francisco Garcia-Garcia, Joaquin Dopazo, Bart Bijnens, Eduard Gratacos. {{:gonzalez-tendero2013.pdf|Heart and Circulatory Physiology. Published 4 October 2013 Vol. no. DOI: 10.1152/ajpheart.00514.2013}}. **Physiology, rank: 12/81, Q1, IF: 4.012**. ***Mammosphere Formation in Breast Carcinoma Cell Lines Depends upon Expression of E-cadherin**. Juan Manuel Iglesias, Izaskun Beloqui, Francisco Garcia-Garcia, Olatz Leis, Alejandro Vazquez Martin, Arrate Eguiara, Silvia Cufi, Andres Pavon, Javier A. Menendez, Joaquin Dopazo, Angel G. Martin. {{:mammosphere_2013.pdf|PLoS ONE 8(10): e77281. doi:10.1371/journal.pone.0077281}}. **Multidisciplinary Sciences, rank: 8/55, Q1, IF: 3.534**. ***Role of CPI-17 in restoring skin homoeostasis in cutaneous field of cancerization: effects of topical application of a film-forming medical device containing photolyase and UV filters**. Puig-Butillé JA, Malvehy J, Potrony M, Trullas C, Garcia-García F, Dopazo J, Puig S. {{::exd12177.pdf|Experimental Dermatology. Volume 22, Issue 7, 2013}}. **Dermatology, rank:6/61, Q1, IF: 4.115**. ***Grape antioxidant dietary fiber (GADF) inhibits intestinal polyposis in ApcMin/+ mice: relation to cell cycle and immune response**. Susana Sanchez-Tena; Daneida Lizarraga; Anibal Miranda; Maria Pilar Vinardell; Francisco Garcia-Garcia; Joaquin Dopazo; Josep Lluis Torres; Fulgencio Saura-Calixto; Gabriel Capella; Marta Cascante. {{:sanchez-tena2013.pdf|Carcinogenesis 2013; doi: 10.1093/carcin/bgt140}}. **Oncology, rank: 32/203, Q1, IF: 5.226**. ***Novel genes detected by transcriptional profiling from whole-blood cells in patients with early onset of acute coronary syndrome**. Vivian N. Silbiger, André D. Luchessi, Rosário D.C. Hirata, Lídio G. Lima-Neto, Débora Cavichioli, Angel Carracedo, Maria Brión, Joaquín Dopazo, Francisco García-García, Elizabete S. dos Santos, Rui F. Ramos, Marcelo F. Sampaio, Dikran Armaganijan, Amanda G.M.R. Sousa, Mario H. Hirata. [[http://www.sciencedirect.com/science/article/pii/S0009898113001022|Clin Chim Acta. 2013 Mar 24. pii: S0009-8981(13)00102-2. doi: 10.1016/j.cca.2013.03.011]]. **Medical Laboratory Technology, rank: 7/31, Q1, IF: 2.764**. ***Maslinic Acid-Enriched Diet Decreases Intestinal Tumorigenesis in ApcMin/+ Mice through Transcriptomic and Metabolomic Reprogramming**. Susana Sánchez-Tena, Fernando J. Reyes-Zurita, Santiago Díaz-Moralli, Maria Pilar Vinardell, Michelle Reed, Francisco García-García, Joaquín Dopazo, José A. Lupiáñez, Ulrich Günther, Marta Cascante {{::masilinic_acid.pdf|PLoS One. 2013;8(3):e59392. doi: 10.1371/journal.pone.0059392. Epub 2013 Mar 18}}. **Multidisciplinary sciences, rank: 8/55, Q1, IF: 3.534**. *** Web applications in teaching statistics and analysis of genomic data**. {{::babelomics_2013.pdf|Teaching statistics. Experiences of innovation}}. ISBN: 978-84-9858-872-9. Add Editorial. Pages: 201-209. Feb 2013. Francisco García-García, David Montaner González. ***Expression profiling shows differential molecular pathways and provides potential new diagnostic biomarkers for colorectal serrated adenocarcinoma**. Conesa-Zamora P, García-Solano J, García-García F, Del Carmen Turpin M, Trujillo-Santos J, Torres-Moreno D, Oviedo-Ramírez I, Carbonell-Muñoz R, Muñoz-Delgado E, Rodriguez-Braun E, Conesa A, Pérez-Guillermo M. {{::expression_profiling_2012.pdf|Int J Cancer. Jan 2013. doi: 10.1002/ijc.27674}}. **Oncology, rank: 34/203, Q1, IF: 5.007**. \\ **2012-2011** \\ ***Development, Characterization and Experimental Validation of Sunflower (Helianthus annuus L.) Gene Expression Oligonucleotide Microarray**. P. Fernandez, M. Soria, D. Blesa, J. Di Rienzo, S. Moschen, L. Peluffo, M. Rivarola, S. González, B. Clavijo, D. Príncipi, G. Dosio, L. Aguirrezaba, F. Garcia-Garcia, A. Conesa, H.E. Hopp, J. Dopazo, R.A. Heinz and N. Paniego [[http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0045899|PLoS ONE 7(10): e45899, Oct 2012. doi:10.1371/journal.pone.0045899]]. **Multidisciplinary sciences, rank: 7/56, Q1, IF: 3.730**. ***IL-1ß induces migration, cell adhesion and leucocyte chemotaxis in mesenchymal stem cells through NF-ĸB signaling pathway**. Rubén Carrero, Inmaculada Cerrada, Elisa Lledó, Joaquín Dopazo, Francisco García-García, M. Paz Rubio, César Trigueros, Akaitz Dorronsoro, Amparo Ruiz-Sauri, Jose Anastasio Montero and Pilar Sepúlveda. [[http://www.ncbi.nlm.nih.gov/pubmed/22467443 |Stem Cell Reviews and Reports. 2012 Mar 31]]. **Medicine, Research & Experimental, rank: 21/121, Q1, IF: 4.523**. ***Early Peroxisome proliferator-activated receptor gamma regulated genes involved in expansion of pancreatic beta cell mass**. Yurena Vivas, Cristina Martínez-García, Adriana Izquierdo, Francisco Garcia-Garcia, Sergio Callejas, Ismael Velasco, Mark Campbell, Manuel Ros, Ana Dopazo, Joaquin Dopazo, Antonio Vidal-Puig and Gema Medina-Gomez. [[http://www.biomedcentral.com/1755-8794/4/86|BMC Med Genomics. 2011 Dec 30;4(1):86]]. **Genetics & Hereditary, rank: 44/158, Q2, IF: 3.693**. ***Does singlet oxygen activate cell death in Arabidopsis cell suspension cultures?**. Jorge Gutiérrez, Sergio González-Pérez, Francisco García-García, Óscar Lorenzo and Juan B. Arellano. [[ http://www.landesbioscience.com/journals/psb/article/18264/# |Plant Signaling & Behavior. Volume 6, Issue 12, December 2011]]. **IF: 1.47**. ***Early transcriptional defence responses in Arabidopsis cell suspension culture under high light conditions**. Sergio González-Pérez, Jorge Gutiérrez, Francisco García-García, Daniel Osuna, Joaquín Dopazo, Óscar Lorenzo, José L. Revuelta and Juan B. Arellano. {{:plant.pdf|Plant Physiology. July 2011 vol. 156 no. 3 1439-1456}}. **Plant Sciences, rank: 7/190, Q1, IF: 6.535**. \\ **2010-2008** \\ ***Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling**. Medina, Ignacio; Carbonell, Jose; Pulido, Luis; Madeira, Sara; Götz, Stefan; Conesa, Ana; Tarraga, Joaquín; Pascual-Montano, Alberto; Nogales-Cadenas, Ruben; Santoyo-Lopez, Javier; García-García, Francisco; Marba,Martina; Montaner, David; Dopazo, Joaquin. {{ :babelomics_nar2010.pdf|NAR-00461-Web-B-2010.R1 }}. **Biochemistry & Molecular Biology, rank: 30/286, Q1, IF: 7.836**. ***Functional assessment of time course microarray data**. María José Nueda, Patricia Sebastián, Sonia Tarazona, Francisco García-García, Joaquín Dopazo, Alberto Ferrer and Ana Conesa. {{:functionalassessment_bmcbioinformatics.pdf|BMC Bioinformatics 2009, 10(Suppl 6):S9 doi:10.1186/1471-2105-10-S6-S9.}} **Mathematical & Computational Biology, rank:4/37, Q1, IF: 3.428**. ***Direct functional assessment of the composite phenotype through multivariate projection strategies**. Ana Conesa, Rasmus Bro, Francisco García-García, José Manuel Prats-Montalbán, Stefan Goetz, Karin Kjeldahl, David Montaner. {{:genomics.pdf|Genomics. Volume 92, Issue 6. December 2008, pages 373-383.}} **Biotechnology & Applied Microbiology, rank: 35/144, Q1, IF: 3.075**. ***GEPAS, web based tool for microarray data analysis and interpretation**. Joaquín Tárraga, Ignacio Medina, José Carbonell, Jaime Huerta-Cepas, Pablo Minguez, Eva Alloza, Fátima Al-Shahrour, Stefan Goetz, Pablo Escobar, Francisco García-García, Ana Conesa, David Montaner and Joaquín Dopazo. {{:gepas_nar2008.pdf|NAR-00221-Web-B-2008.R1.}} **Biochemistry & Molecular Biology, rank: 33/275, Q1, IF: 6.878**. \\ ===== Public Health and Epidemiology ===== \\ __Papers__\\ ***Prevalence of exposure to occupational risks in pregnant Spanish workers (the INMA Project-Valencia)**. M. Carmen González-Galarzo, Ana M. García, Marisa Estarlich, Francisco García-García, Ana Esplugues, Paz Rodríguez, Marisa Rebagliato, Ferran Ballester. {{:prevalencias_de_exposicion_a_riesgos_laborales_en_trabajadoras_embarazadas.pdf|Gaceta Sanitaria, 2009; 23(5): 420-426}}. **Public, Environmental & Occupational Health, rank: 84/122, Q3, IF: 1.172**. ***Health impact evaluation of particle air pollution in five Spanish cities. European APHEIS Project**. Eva Alonso Fustel, Antonio Daponte Codina, Inmaculada Aguilera Jiménez, Silvia Toro Cárdenas, Carmen Iñiguez Hernández, Ferran Ballester Díez, Francisco García-García, Antoni Plasencia Taradach, Lucía Artazcoz Lazcano y Silvia Medina. {{:evaluacion_en_cinco_ciudades...resp_2005.pdf|Revista Española de Salud Pública, volume 79, number 2, 297, March-April 2005.}} **Public, Environmental & Occupational Health, rank: 127/143, IF: 0.6**. __Books__\\ ***Territorial analysis of mortality in Catalunya, 1999-2004**. Research and Information Unit. Health Department. Generalitat de Catalunya, 2007. Francisco García-García, Anna Puigdefàbregas, Rosa Gispert, Jaume Domènech. *{{:mortalitat2005.pdf|Analysis of mortality in Catalunya, 2005.}} Research and Information Unit. Health Department. Generalitat de Catalunya, 2007. Francisco García-García, Anna Puigdefàbregas, Rosa Gispert, Jaume Domènech. *{{:mortalitat2004.pdf|Analysis of mortality in Catalunya, 2004.}} Research and Information Unit. Health Department. Generalitat de Catalunya, 2006. Francisco García-García, Anna Puigdefàbregas, Rosa Gispert, Jaume Domènech. \\ ===== Teaching Methods ===== \\ *{{::babelomics_2013.pdf|Teaching statistics. Experiences of innovation}}. ISBN: 978-84-9858-872-9. Add Editorial. Web applications in teaching statistics and analysis of genomic data. Pages: 201-209. Feb 2013. Francisco García-García, David Montaner González.