Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision Next revision | Previous revision | ||
|
espinos:results.primary.analysis.2 [2015/08/08 17:53] cespinos |
espinos:results.primary.analysis.2 [2016/06/24 15:51] (current) fgarcia |
||
|---|---|---|---|
| Line 5: | Line 5: | ||
| === All unique variants detected === | === All unique variants detected === | ||
| - | {{:espinos:intersect_all_variants_bier_ssv5vscnag.png?410|}} | + | {{:espinos:images_ana:intersect_all_variants_bier_ssv5vscnag.png?410|}} |
| === Unique variants detected in neuropathies-related genes === | === Unique variants detected in neuropathies-related genes === | ||
| - | {{:espinos:intersect_genes_variants_bier_ssv5vscnag.png?410|}} | + | {{:espinos:images_ana:intersect_genes_variants_bier_ssv5vscnag.png?410|}} |
| === Summary by sample === | === Summary by sample === | ||
| * **N_var**: number of total variants detected by each pipeline | * **N_var**: number of total variants detected by each pipeline | ||
| - | * **N_var_neuropathies**: number of variants detected by each pipeline founded in neuropathies-related genes | + | * **N_var_neuropathies**: number of variants detected by each pipeline found in neuropathies-related genes |
| * **N_var intersect**: number of total variants detected by both pipelines | * **N_var intersect**: number of total variants detected by both pipelines | ||
| - | * **N_var_neuropathies intersect**: number of variants detected by both pipelines founded in neuropathies-related genes | + | * **N_var_neuropathies intersect**: number of variants detected by both pipelines and localised in neuropathies-related genes |
| Line 42: | Line 42: | ||
| * **N_Tv**: number of variants involving transversions (A↔C, G↔T) detected by each pipeline | * **N_Tv**: number of variants involving transversions (A↔C, G↔T) detected by each pipeline | ||
| * **Ts_Tv Ratio**: ratio between the number of transitions and transversions | * **Ts_Tv Ratio**: ratio between the number of transitions and transversions | ||
| - | * **%_PASS**: percentage of variants tagged as "PASS" according to the parameter's criteria assumed by each pipeline | + | * **%_PASS**: percentage of variants tagged as "PASS" according to the parameters criteria assumed by each pipeline |
| * **Mean quality**: mean quality of variants detected by each pipeline | * **Mean quality**: mean quality of variants detected by each pipeline | ||
