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Table of Contents
2.2 Coverage Analysis - All exome coverage
BIER's pipeline
| Sample | Total_cov_bases | Mean_cov | Median_cov | %_bases_>15 | %_bases_>30 | %_bases_>40 | %_bases_>50 |
|---|---|---|---|---|---|---|---|
| SGT230 | 1824828765 | 36.24 | 35 | 88.2 | 58.1 | 38.8 | 23.5 |
| SGT241 | 1762155688 | 34.99 | 33 | 87.2 | 55.9 | 36.4 | 21.3 |
| SGT038 | 1839178575 | 36.52 | 35 | 88.2 | 58.2 | 39.2 | 24.0 |
| SGT161 | 1634278064 | 32.45 | 31 | 84.5 | 50.6 | 31.1 | 17.1 |
| SGT077 | 1617599251 | 32.12 | 30 | 84.2 | 49.6 | 30.3 | 16.6 |
| SGT238 | 1750563070 | 34.76 | 33 | 86.8 | 55.0 | 35.7 | 21.0 |
| SGT187 | 1738854865 | 34.53 | 33 | 86.8 | 55.0 | 35.4 | 20.4 |
| SGT274 | 1822284846 | 36.18 | 34 | 88.0 | 58.1 | 38.8 | 23.4 |
CNAG's pipeline
