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espinos:results.coverage.analysis [2015/08/06 19:42] cespinos |
espinos:results.coverage.analysis [2015/08/12 11:05] (current) cespinos [2.2 Coverage Analysis - All exome coverage] |
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| * **Total_Cov_bases**: total sum of all base pairs coverage of each interval (exome capture kit target) | * **Total_Cov_bases**: total sum of all base pairs coverage of each interval (exome capture kit target) | ||
| - | * **Mean_Cov, Median_Cov**: mean and median coverage by interval | + | * **Mean_Cov, Median_Cov**: mean and median coverage of all intervals |
| - | * **%_bases_>15, >30, >40, >50**: percentage of base pairs covered by more than 15, 30, 40 or 50 reads | + | * **%_bases_>15, >30, >40, >50**: percentage of intervals base pairs covered by more than 15, 30, 40 or 50 reads |
