{{selectedOptionText}}
{{entry.section}}
{{entry.option}}
{{gene.name}}
{{gene.id}}
Ensembl
Wikipathways
Location:
{{gene.chromosome}}
:
{{gene.start}}
-
{{gene.end}}
Strand:
{{gene.strand}}
Biotype:
{{gene.biotype}}
Description:
{{gene.description}}
Source:
{{gene.source}}
Status:
{{gene.status}}
{{transcript.name}}
{{transcript.id}}
Ensembl
Location:
{{transcript.chromosome}}
:
{{transcript.start}}
-
{{transcript.end}}
Strand:
{{transcript.strand}}
Biotype:
{{transcript.biotype}}
Description:
{{transcript.description}}
CDS (start-end):
{{transcript.genomicCodingStart}}
-
{{transcript.genomicCodingEnd}}
CDNA (start-end):
{{transcript.cdnaCodingStart}}
-
{{transcript.cdnaCodingEnd}}
Protein:
{{transcript.proteinID}}
External DB:
{{transcript.externalDb}}
Status:
{{transcript.status}}
{{xref.id}}
{{transcript.name}}
{{transcript.id}}
{{count}}
items
{{protein.id}}
Gene information
{{exon.id}}
Ensembl
Location:
{{exon.chromosome}}
:
{{exon.start}}
-
{{exon.end}}
Strand:
{{exon.strand}}
{{snp.id}}
Ensembl
Location:
{{snp.chromosome}}
:
{{snp.start}}
-
{{snp.end}}
Strand:
{{snp.strand}}
Alleles:
{{snp.alleleString}}
Ancestral:
{{snp.ancestralAllele}}
Reference:
{{snp.reference}}
Alternate:
{{snp.alternate}}
Most severe SO term:
{{snp.displayConsequenceType}}
Transcript information
SNP information
{{label}}
{{loadingMsg}}
Page
of
{{computePageTotal(pageSize, itemCount)}}
items
{{pageFirstItem}}
-
{{pageLastItem}}
of
{{itemCount}}
Total:
{{itemCount}}
{{item.title}}
{{study.name}}
{{project.name}}
{{project.name}}
{{study.name}}
{{bioformat.text}}
{{bioformat.text}}
Studies:
File path:
/
{{selectedProject.name}}
/
{{selectedStudy.name}}
/
{{selectedFolder.name}}
Bioformat:
Choose file...
Selected file name:
{{fileName}}
Upload
{{percentProgress}}
%
{{message}}
Folder name
Create
{{message}}
{{file.name}}
{{computeDate(file)}}
{{computeStatus(file)}}
{{file.name}}
Upload
+
Index
Name
Date
Status
{{fileName}}
Type:
{{fileType}}
Bioformat:
{{fileBioformat}}
Status:
{{computeIndex(selected)}}
Creation Date:
{{fileDate}}
Create folder
Projects:
{{item.name}}
Study type
Family
Case / Control
Trio
Paired
Case set
Control set
/
{{selectedProject.project.name}}
{{selectedStudy.study.name}}
{{item.name}}
+
+
OK
Upload file
Create project
Create study
File Preview
{{contentData}}
{{job.name}}
{{computeToolName(job)}}
{{computeStatus(job)}}
{{computeDate(job)}}
Description:
{{jobDescription}}
Error:
{{jobError}}
Error Description:
{{jobErrorDescription}}
Error Log
Out Log
File Preview
{{contentData}}
Select tool
{{toolName}}
All
Login
User
Create new user...
Password
Remember password...
Login
{{message}}
Create a new user
User name
E-mail
Create a password
Confirm your password
Sign up
{{message}}
User profile
Old password
New password
Check password
Change password
New e-mail
Change e-mail
{{message}}
Remember password
User ID
e-mail
Send email with new password
{{message}}
{{userText}}
upload
jobs
profile
logout
Try
Login
Sign up
Core
Sequence
Gene/Transcript
Variation
SNP
EMBL-EBI EVA SNVs
Clinical Variants
Regulatory
TFBS
miRNA Targets
Others
Conservation
PhastCons
PhyloP
{{response.id}}
(
{{response.numResults}}
)
{{feature.id}}
{{feature.name}}
Search by any external reference
Result type
{{resultType}}
Search
Results
{{computeBase(mousePosition)}}
{{computeMousePosition(mousePosition)}}
SNP legend
Gene legend
v
{{version}}
{{track.title}}
Created by Computational Genomics Department @ Principe Felipe Research Center, 2015
Active tracks
Add CellBase tracks
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Genome Maps
{{selectedSpecies.scientificName}}
{{selectedSpecies.assembly.name}}
Tracks
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Source code